Journal: Experimental Hematology & Oncology
Article Title: The lncRNA PARylator promotes PARP1 activation and resistance to DNA‑damaging therapy in esophageal squamous cell carcinoma
doi: 10.1186/s40164-025-00739-z
Figure Lengend Snippet: PARylator promotes ESCC cell survival and proliferation. a and b SiRNA knockdown of PARylator (a) reduced ESCC cell viability (b) as measured using qPCR (a) and CCK-8 assays (b), respectively. Co-transfection of the PARylator siRNA with an siRNA-resistant PARylator expression plasmid rescued both PARylator expression (a) and cell viability (b). Data shown are mean ± s.d.; n = 3 independent experiments, one-way ANOVA followed by Tukey’s multiple comparison test. c and d Representative photographs (c) and quantification (d) of clonogenic assays in ESCC cells with or without siRNA knockdown of PARylator. Data shown are representatives (c) or mean ± s.d. (d); n = 3 independent experiments, one-way ANOVA followed by Tukey’s multiple comparison test. Scale bar, 1 cm. e SiRNA knockdown of PARylator induced apoptosis in ESCC cells, as measured using flowcytometry analysis of Annexin V/propidium iodide staining, Co-transfection of the PARylator siRNA with an siRNA-resistant PARylator expression plasmid rescued cell apoptosis. Data shown are mean ± s.d.; n = 3 independent experiments, one-way ANOVA followed by Tukey’s multiple comparison test. f SiRNA knockdown of PARylator caused S phase arrest in TE13 cells, as determined by flowcytometry analysis of propidium iodide staining. Data shown are mean ± s.d.; n = 3 independent experiments, one-way ANOVA followed by Tukey’s multiple comparison test. g SiRNA knockdown of PARylator induced caspase-3 activation (cleavage), as measured using Western blotting with an anti-cleaved caspase-3 Ab, Data shown are representatives; n = 3 independent experiments. h SiRNA knockdown of PARylator caused upregulation of PUMA and NOXA, as measured in ESCC cells, as determined by Western blotting. Data shown are representatives; n = 3 independent experiments. i Gene Set Enrichment Analysis (GSEA) of RNA-seq data from TE13 cells showing that knockdown of PARylator using two independent siRNA caused enrichment of the HALLMARK_APOPTOSIS signature. n = 3 experimental repeats. j Induced knockdown of PARylator by treatment with doxycycline (Dox, 200 ng/ml), with knockdown effects attenuated upon Dox withdrawal in TE13.shPARylator and ECA109.PARylator cells. Data shown are mean ± s.d.; n = 3 independent experiments, two-tailed Student’s t -test. k and l Representative photographs (k) and quantification (l) of clonogenic assays in TE13.shPARylator and ECA109.PARylator cells, with or without induced knockdown of PARylator by treatment with doxycycline (Dox, 200 ng/ml). Cessation of Dox treatment led to restoration of PARylator levels and recovery of clonogenic growth. Data shown are representatives (k) or mean ± s.d. (l); n = 3 independent experiments, two-tailed Student’s t -test. Scale bar, 1 cm
Article Snippet: Cell Counting Kit-8 (CCK8) solution (Med Chem Express, #HY-K0301) was added and incubated at 37 °C for 2 h. The absorbance at 450 nm was recorded using a Varioskan LUX microplate reader (ThermoFisher Scientific).
Techniques: Knockdown, CCK-8 Assay, Cotransfection, Expressing, Plasmid Preparation, Comparison, Staining, Activation Assay, Western Blot, RNA Sequencing, Two Tailed Test